LEVEL	TAXA	ROLLUP	ASSIGNED	TAXID
root	root	4993965	7928	1
superkingdom	Bacteria	4948801	8786	2
superkingdom	Archaea	36831	0	2157
superkingdom	Viruses	254	0	10239
phylum	Deinococcus-Thermus	1891013	0	1297
phylum	Proteobacteria	1204631	4074	1224
phylum	Firmicutes	1138945	842	1239
phylum	Bacteroidetes	495467	113	976
phylum	Actinobacteria	209924	0	201174
phylum	Euryarchaeota	36831	4	28890
phylum	Tenericutes	7	0	544448
phylum	Spirochaetes	5	0	203691
phylum	Cyanobacteria	4	0	1117
phylum	Chloroflexi	3	0	200795
phylum	Synergistetes	3	0	508458
phylum	Thermotogae	2	0	200918
phylum	Planctomycetes	2	0	203682
phylum	Dictyoglomi	1	0	68297
phylum	Acidobacteria	1	0	57723
phylum	Gemmatimonadetes	1	0	142182
phylum	Nitrospirae	1	0	40117
subphylum	delta/epsilon subdivisions	145228	1	68525
class	Deinococci	1891013	495	188787
class	Bacilli	934822	1419	91061
class	Gammaproteobacteria	769186	1081	1236
class	Bacteroidia	495348	0	200643
class	Actinobacteria	209924	34	1760
class	Clostridia	203279	19	186801
class	Alphaproteobacteria	159515	658	28211
class	Epsilonproteobacteria	145195	49	29547
class	Betaproteobacteria	126628	176	28216
class	Methanobacteria	36826	0	183925
class	Deltaproteobacteria	32	0	28221
class	Coriobacteridae	7	0	84998
class	Mollicutes	7	0	31969
class	Spirochaetia	5	0	203692
class	Synergistia	3	0	649775
class	Cytophagia	3	0	768503
class	Chloroflexi	3	1	32061
class	Sphingobacteriia	2	0	117747
class	Thermotogae	2	0	188708
class	Rubrobacteridae	2	0	84995
class	Negativicutes	2	0	909932
class	Acidimicrobidae	2	0	84992
class	Dictyoglomia	1	0	203486
class	Halobacteria	1	0	183963
class	Gloeobacteria	1	0	307596
class	Nitrospira	1	0	203693
class	Gemmatimonadetes	1	0	219685
class	Acidobacteriia	1	0	204432
class	Planctomycetia	1	0	203683
class	Phycisphaerae	1	0	666505
class	Flavobacteriia	1	0	117743
subclass	Oscillatoriophycideae	2	0	1301283
order	Deinococcales	1890510	200	118964
order	Pseudomonadales	686098	25	72274
order	Bacillales	580557	524	1385
order	Bacteroidales	495348	2791	171549
order	Lactobacillales	352846	278	186826
order	Actinomycetales	209714	718	2037
order	Propionibacterineae	207879	8	85009
order	Clostridiales	203258	101	186802
order	Rhodobacterales	158777	9	204455
order	Campylobacterales	145145	64	213849
order	Neisseriales	126285	0	206351
order	Enterobacteriales	81273	0	91347
order	Methanobacteriales	36826	0	2158
order	Xanthomonadales	708	0	135614
order	Micrococcineae	416	56	85006
order	Corynebacterineae	415	31	85007
order	Caudovirales	196	0	28883
order	Burkholderiales	162	3	80840
order	Streptomycineae	74	0	85011
order	Rhizobiales	56	7	356
order	Bifidobacteriales	49	0	85004
order	Frankineae	48	0	85013
order	Streptosporangineae	42	0	85012
order	Micromonosporineae	41	0	85008
order	Pseudonocardineae	40	0	85010
order	Myxococcales	18	0	29
order	Glycomycineae	16	0	85014
order	Desulfovibrionales	11	0	213115
order	Kineosporiineae	11	0	622452
order	Rhodospirillales	8	1	204441
order	Sphingomonadales	8	1	204457
order	Thermales	8	0	68933
order	Coriobacteriales	7	0	84999
order	Mycoplasmatales	6	0	2085
order	Pasteurellales	6	0	135625
order	Alteromonadales	6	0	135622
order	Spirochaetales	5	0	136
order	Caulobacterales	4	0	204458
order	Rickettsiales	4	0	766
order	Catenulisporineae	4	0	414714
order	Synergistales	3	0	649776
order	Oceanospirillales	3	0	135619
order	Cytophagales	3	1	768507
order	Chromatiales	3	0	135613
order	Acidimicrobiales	2	0	84993
order	Rubrobacterales	2	0	84996
order	Thermotogales	2	0	2419
order	Rhodocyclales	2	0	206389
order	Selenomonadales	2	0	909929
order	Legionellales	2	0	118969
order	Chloroflexales	2	0	32064
order	Hydrogenophilales	2	0	119069
order	Thermoanaerobacterales	2	0	68295
order	Thiotrichales	2	0	72273
order	Chroococcales	2	2	1118
order	Sphingobacteriales	2	0	200666
order	Desulfuromonadales	2	0	69541
order	Vibrionales	2	0	135623
order	Aeromonadales	1	0	135624
order	Phycisphaerales	1	0	666506
order	Nitrospirales	1	0	189778
order	Dictyoglomales	1	0	203487
order	Flavobacteriales	1	0	200644
order	Herpesvirales	1	0	548681
order	Halobacteriales	1	0	2235
order	Gloeobacterales	1	0	307595
order	Acidobacteriales	1	0	204433
order	Entomoplasmatales	1	0	186328
order	Bdellovibrionales	1	0	213481
order	Nostocales	1	0	1161
order	Gemmatimonadales	1	0	219686
order	Planctomycetales	1	0	112
suborder	Cystobacterineae	13	0	80811
suborder	Sorangiineae	3	0	80812
suborder	Nannocystineae	2	0	224462
family	Deinococcaceae	1890308	0	183710
family	Moraxellaceae	650601	271	468
family	Bacteroidaceae	492536	0	815
family	Staphylococcaceae	435743	543	90964
family	Streptococcaceae	282748	198	1300
family	Propionibacteriaceae	207850	39	31957
family	Clostridiaceae	203145	30	31979
family	Rhodobacteraceae	158768	642	31989
family	Helicobacteraceae	145081	64	72293
family	Neisseriaceae	126285	107	481
family	Listeriaceae	101364	0	186820
family	Enterobacteriaceae	81273	60894	543
family	Enterococcaceae	68405	38	81852
family	Bacillaceae	42914	26	186817
family	Methanobacteriaceae	36826	15	2159
family	Pseudomonadaceae	35472	139	135621
family	Lactobacillaceae	1411	0	33958
family	Xanthomonadaceae	708	38	32033
family	Corynebacteriaceae	253	0	1653
family	Siphoviridae	195	4	10699
family	Micrococcaceae	98	0	1268
family	Burkholderiaceae	93	0	119060
family	Streptomycetaceae	74	0	2062
family	Nocardiaceae	66	1	85025
family	Microviridae	53	0	10841
family	Bifidobacteriaceae	49	0	31953
family	Microbacteriaceae	47	5	85023
family	Mycobacteriaceae	47	0	1762
family	Comamonadaceae	45	2	80864
family	Micromonosporaceae	41	0	28056
family	Cellulomonadaceae	41	0	85016
family	Pseudonocardiaceae	40	0	2070
family	Promicromonosporaceae	34	4	85017
family	Dermabacteraceae	30	0	85020
family	Beutenbergiaceae	29	0	125316
family	Jonesiaceae	29	0	85022
family	Nocardiopsaceae	29	10	83676
family	Nakamurellaceae	23	0	85031
family	Nocardioidaceae	21	0	85015
family	Dermacoccaceae	20	0	145357
family	Sanguibacteraceae	20	0	145360
family	Frankiaceae	18	0	74712
family	Rhizobiaceae	17	3	82115
family	Glycomycetaceae	16	0	85034
family	Myxococcaceae	12	2	31
family	Intrasporangiaceae	12	0	85021
family	Porphyromonadaceae	11	0	171551
family	Kineosporiaceae	11	0	83778
family	Desulfovibrionaceae	11	0	194924
family	Bradyrhizobiaceae	11	1	41294
family	Actinomycetaceae	10	0	2049
family	Alcaligenaceae	9	0	506
family	Prevotellaceae	9	0	171552
family	Thermaceae	8	0	188786
family	Paenibacillaceae	8	0	186822
family	Streptosporangiaceae	8	0	2004
family	Gordoniaceae	8	0	85026
family	Coriobacteriaceae	7	0	84107
family	Sphingomonadaceae	7	0	41297
family	Geodermatophilaceae	7	0	85030
family	Pasteurellaceae	6	0	712
family	Tsukamurellaceae	6	0	85028
family	Mycoplasmataceae	6	0	2092
family	Rhodospirillaceae	6	0	41295
family	Hyphomicrobiaceae	6	0	45401
family	Phyllobacteriaceae	5	0	69277
family	Thermomonosporaceae	5	0	2012
family	Alteromonadaceae	4	0	72275
family	Peptococcaceae	4	0	186807
family	Segniliparaceae	4	0	316606
family	Catenulisporaceae	4	0	414877
family	Caulobacteraceae	4	2	76892
family	Spirochaetaceae	4	1	137
family	Anaplasmataceae	4	0	942
family	Oscillospiraceae	4	0	216572
family	Oxalobacteraceae	4	0	75682
family	Methylobacteriaceae	3	0	119045
family	Polyangiaceae	3	0	49
family	Methylocystaceae	3	0	31993
family	Synergistaceae	3	0	649777
family	Alicyclobacillaceae	3	0	186823
family	Vibrionaceae	2	1	641
family	Thermotogaceae	2	1	188709
family	Cytophagaceae	2	0	89373
family	Hahellaceae	2	0	224379
family	Kofleriaceae	2	0	224464
family	Francisellaceae	2	0	34064
family	Leuconostocaceae	2	0	81850
family	Carnobacteriaceae	2	0	186828
family	Acidimicrobiaceae	2	0	84994
family	Trueperaceae	2	0	332247
family	Rubrobacteraceae	2	0	84997
family	Hydrogenophilaceae	2	0	206349
family	Ectothiorhodospiraceae	2	0	72276
family	Rhodocyclaceae	2	0	75787
family	Eubacteriaceae	2	0	186806
family	Brucellaceae	2	0	118882
family	Chloroflexaceae	2	0	1106
family	Thermodesulfobiaceae	2	0	227387
family	Flavobacteriaceae	1	0	49546
family	Pseudoalteromonadaceae	1	0	267888
family	Shewanellaceae	1	0	267890
family	Brachyspiraceae	1	0	143786
family	Legionellaceae	1	0	444
family	Veillonellaceae	1	0	31977
family	Planococcaceae	1	0	186818
family	Spiroplasmataceae	1	0	2131
family	Xanthobacteraceae	1	0	335928
family	Geobacteraceae	1	0	213422
family	Polydnaviridae	1	0	10482
family	Gemmatimonadaceae	1	0	219687
family	Halobacteriaceae	1	0	2236
family	Coxiellaceae	1	0	118968
family	Chitinophagaceae	1	1	563835
family	Herpesviridae	1	0	10292
family	Planctomycetaceae	1	0	126
family	Dictyoglomaceae	1	0	203488
family	Chromatiaceae	1	0	1046
family	Cystobacteraceae	1	0	39
family	Acidaminococcaceae	1	0	909930
family	Acetobacteraceae	1	0	433
family	Acidobacteriaceae	1	0	204434
family	Nitrospiraceae	1	0	189779
family	Bacteriovoracaceae	1	0	263369
family	Phycisphaeraceae	1	0	666507
family	Rhodobiaceae	1	0	119043
family	Baculoviridae	1	0	10442
family	Aeromonadaceae	1	0	84642
family	Clostridiales Family XVII. Incertae Sedis	1	0	539000
family	Myoviridae	1	0	10662
family	Sphingobacteriaceae	1	0	84566
family	Alcanivoracaceae	1	0	224372
family	Rivulariaceae	1	0	1185
subfamily	Alphaherpesvirinae	1	0	10293
tribe	Wolbachieae	4	0	952
genus	Deinococcus	1890308	14377	1298
genus	Acinetobacter	650327	27538	469
genus	Bacteroides	492536	8243	816
genus	Staphylococcus	435199	46044	1279
genus	Streptococcus	282549	55145	1301
genus	Propionibacterium	207811	1973	1743
genus	Clostridium	203115	2993	1485
genus	Rhodobacter	158118	149	1060
genus	Helicobacter	145017	5814	209
genus	Neisseria	126178	43193	482
genus	Listeria	101364	10232	1637
genus	Enterococcus	68367	45189	1350
genus	Bacillus	42884	95	1386
genus	Methanobrevibacter	36810	38	2172
genus	Pseudomonas	35333	964	286
genus	Escherichia	19758	1023	561
genus	Lactobacillus	1411	56	1578
genus	Stenotrophomonas	658	0	40323
genus	Serratia	530	25	613
genus	Corynebacterium	253	30	1716
genus	Burkholderia	73	19	32008
genus	Streptomyces	69	22	1883
genus	Microvirus	53	2	10842
genus	Rhodococcus	52	1	1827
genus	Bifidobacterium	49	16	1678
genus	Mycobacterium	47	21	1763
genus	Rothia	42	0	32207
genus	Cellulomonas	41	3	1707
genus	Shigella	35	1	620
genus	Brachybacterium	30	0	43668
genus	Jonesia	29	0	43673
genus	Beutenbergia	29	0	84756
genus	Acidovorax	28	14	12916
genus	Actinoplanes	27	2	1865
genus	Nakamurella	23	0	53460
genus	Arthrobacter	23	4	1663
genus	Micrococcus	21	0	1269
genus	Microbacterium	21	0	33882
genus	Sanguibacter	20	0	60919
genus	Kytococcus	20	0	57499
genus	Frankia	18	0	1854
genus	Xylanimonas	18	0	186188
genus	Ralstonia	16	1	48736
genus	Stackebrandtia	16	0	283810
genus	Nocardiopsis	16	1	2013
genus	Enterobacter	16	1	547
genus	Clavibacter	15	0	1573
genus	Nocardia	13	4	1817
genus	Intrasporangium	12	0	53357
genus	Isoptericola	12	0	254250
genus	Kineococcus	11	0	33981
genus	Kribbella	11	0	182639
genus	Amycolatopsis	11	0	1813
genus	Saccharomonospora	11	0	1851
genus	Desulfovibrio	11	2	872
genus	Nocardioides	10	0	1839
genus	Comamonas	9	0	283
genus	Citrobacter	9	1	544
genus	Prevotella	9	0	838
genus	Xanthomonas	8	5	338
genus	Streptosporangium	8	0	2000
genus	Edwardsiella	8	1	635
genus	Odoribacter	8	0	283168
genus	Gordonia	8	0	2053
genus	Micromonospora	7	5	1873
genus	Bradyrhizobium	7	1	374
genus	Paenibacillus	7	0	44249
genus	Salinispora	7	0	168694
genus	Geodermatophilus	7	0	1860
genus	Kocuria	7	0	57493
genus	Mobiluncus	7	0	2050
genus	Leifsonia	6	0	110932
genus	Mycoplasma	6	2	2093
genus	Salmonella	6	0	590
genus	Tsukamurella	6	0	2060
genus	Myxococcus	6	0	32
genus	Thermus	6	0	270
genus	Actinosynnema	6	0	40566
genus	Renibacterium	5	0	1645
genus	Saccharopolyspora	5	0	1835
genus	Mesorhizobium	5	1	68287
genus	Haemophilus	5	0	724
genus	Pseudonocardia	5	0	1847
genus	Thermomonospora	5	0	2019
genus	Rhizobium	5	1	379
genus	Kitasatospora	5	0	2063
genus	Thiomonas	5	0	32012
genus	Segniliparus	4	0	286801
genus	Candidatus Liberibacter	4	0	34019
genus	Oscillibacter	4	0	459786
genus	Sphingomonas	4	0	13687
genus	Tistrella	4	0	171436
genus	Bordetella	4	2	517
genus	Herbaspirillum	4	0	963
genus	Paracoccus	4	0	265
genus	Wolbachia	4	1	953
genus	Achromobacter	4	0	222
genus	Atopobium	4	0	1380
genus	Klebsiella	4	0	570
genus	Catenulispora	4	0	414878
genus	Sorangium	3	0	39643
genus	Arcanobacterium	3	0	28263
genus	Psychrobacter	3	1	497
genus	Geobacillus	3	1	129337
genus	Pseudoxanthomonas	3	0	83618
genus	Thermobifida	3	0	83677
genus	Fretibacterium	3	0	1434006
genus	Cupriavidus	3	1	106589
genus	Methylocystis	3	0	133
genus	Rhodopseudomonas	3	0	1073
genus	Methylobacterium	3	0	407
genus	Gordonibacter	3	0	644652
genus	Desulfotomaculum	3	0	1562
genus	Sinorhizobium	3	0	28105
genus	Porphyromonas	3	0	836
genus	Hyphomicrobium	3	0	81
genus	Alicyclobacillus	3	0	29330
genus	Meiothermus	2	0	65551
genus	Pelagibacterium	2	0	1082930
genus	Sulfuricella	2	0	935200
genus	Francisella	2	1	262
genus	Haliangium	2	0	162027
genus	Erwinia	2	0	551
genus	Rubrivivax	2	0	28067
genus	Treponema	2	0	157
genus	Leuconostoc	2	0	1243
genus	Rubrobacter	2	0	42255
genus	Agrobacterium	2	0	357
genus	Polaromonas	2	0	52972
genus	Eubacterium	2	0	1730
genus	Thioalkalivibrio	2	0	106633
genus	Truepera	2	0	332248
genus	Carnobacterium	2	0	2747
genus	Rhodospirillum	2	0	1081
genus	Cronobacter	2	0	413496
genus	Anaeromyxobacter	2	0	161492
genus	Corallococcus	2	0	83461
genus	Dinoroseobacter	2	0	309512
genus	Hahella	2	0	158481
genus	Variovorax	2	0	34072
genus	Dechloromonas	2	0	73029
genus	Saccharothrix	2	0	2071
genus	Brucella	2	0	234
genus	Marinobacter	1	1	2742
genus	Chloroflexus	1	1	1107
genus	Frateuria	1	0	70411
genus	Brevundimonas	1	0	41275
genus	Solibacillus	1	0	648800
genus	Thermaerobacter	1	0	73918
genus	Ketogulonicigenium	1	0	92944
genus	Alteromonas	1	0	226
genus	Pasteurella	1	0	745
genus	Natrinema	1	0	88723
genus	Dictyoglomus	1	1	13
genus	Acidimicrobium	1	0	53634
genus	Pedobacter	1	0	84567
genus	Ilumatobacter	1	0	682522
genus	Coprothermobacter	1	0	68335
genus	Yersinia	1	1	629
genus	Octadecabacter	1	1	53945
genus	Calothrix	1	0	1186
genus	Brevibacillus	1	0	55080
genus	Sphingobium	1	0	165695
genus	Finegoldia	1	0	150022
genus	Ichnovirus	1	0	10483
genus	Amphibacillus	1	0	29331
genus	Gloeobacter	1	0	33071
genus	Verminephrobacter	1	0	364316
genus	Dickeya	1	0	204037
genus	Xenorhabdus	1	0	626
genus	Simplexvirus	1	0	10294
genus	Taylorella	1	0	29574
genus	Xanthobacter	1	0	279
genus	Roseiflexus	1	0	120961
genus	Allochromatium	1	0	85072
genus	Parvibaculum	1	0	256616
genus	Glaciecola	1	0	89404
genus	Alphabaculovirus	1	0	558016
genus	Caulobacter	1	0	75
genus	Phycisphaera	1	0	666508
genus	Candidatus Azobacteroides	1	0	511434
genus	Spirosoma	1	0	107
genus	Zymomonas	1	0	541
genus	Candidatus Carsonella	1	0	114185
genus	Proteus	1	0	583
genus	Singulisphaera	1	0	466152
genus	Rhodomicrobium	1	0	1068
genus	Acetobacter	1	0	434
genus	Leptothrix	1	0	88
genus	Flavobacterium	1	0	237
genus	Ramlibacter	1	0	174951
genus	Spiroplasma	1	0	2132
genus	Coxiella	1	0	776
genus	Novosphingobium	1	0	165696
genus	Alcanivorax	1	1	59753
genus	Sodalis	1	0	84565
genus	Fervidobacterium	1	0	2422
genus	Pandoraea	1	0	93217
genus	Geobacter	1	0	28231
genus	Gemmatimonas	1	0	173479
genus	Dehalobacter	1	1	56112
genus	Pelobacter	1	0	18
genus	Acidaminococcus	1	1	904
genus	Megasphaera	1	0	906
genus	Bacteriovorax	1	0	146784
genus	Methanobacterium	1	0	2160
genus	Nitrospira	1	0	1234
genus	Stigmatella	1	0	40
genus	Shewanella	1	0	22
genus	Macrococcus	1	0	69965
genus	Thermodesulfobium	1	0	227388
genus	Aeromonas	1	1	642
genus	Flexibacter	1	0	992
genus	Vibrio	1	0	662
genus	Pseudoalteromonas	1	0	53246
genus	Lactococcus	1	1	1357
genus	Sulfurovum	1	0	265570
genus	Granulicella	1	0	940557
genus	Brachyspira	1	1	29521
genus	Pectobacterium	1	1	122277
genus	Buchnera	1	0	32199
genus	Legionella	1	0	445
genus	Saccharophagus	1	0	316625
genus	Candidatus Tremblaya	1	0	189384
genus	Sphaerochaeta	1	0	399320
species group	Acinetobacter calcoaceticus/baumannii complex	622717	19579	909768
species group	Bacillus cereus group	42781	20272	86661
species group	Pseudomonas aeruginosa group	34342	176	136841
species group	pseudomallei group	47	8	111527
species group	Enterobacter cloacae complex	13	0	354276
species group	Pseudomonas stutzeri group	9	0	136846
species group	Pseudomonas putida group	6	1	136845
species group	Pseudomonas pertucinogena group	6	0	136844
species group	Bacillus subtilis group	5	0	653685
species group	Pseudomonas fluorescens group	5	0	136843
species group	Burkholderia cepacia complex	4	1	87882
species group	Mycobacterium chelonae group	4	0	670516
species group	Streptococcus anginosus group	3	0	671232
species group	Mycobacterium tuberculosis complex	2	1	77643
species group	Mycobacterium avium complex (MAC)	2	1	120793
species group	Agrobacterium tumefaciens complex	1	0	1183400
species group	Methylobacterium extorquens group	1	0	578822
species group	Streptococcus dysgalactiae group	1	0	119603
species subgroup	Pseudomonas stutzeri subgroup	9	0	578833
species subgroup	Streptomyces griseus group	8	0	629295
species subgroup	Mycobacterium abscessus subgroup	4	0	670506
species	Deinococcus radiodurans	1875669	0	1299
species	Acinetobacter baumannii	603071	435083	470
species	Bacteroides vulgatus	484285	0	821
species	Staphylococcus epidermidis	230511	162914	1282
species	Propionibacterium acnes	205787	204524	1747
species	Clostridium beijerinckii	200109	0	1520
species	Staphylococcus aureus	158270	145091	1280
species	Rhodobacter sphaeroides	157967	93890	1063
species	Helicobacter pylori	139196	138856	210
species	Streptococcus pneumoniae	131744	121861	1313
species	Streptococcus mutans	91271	80903	1309
species	Listeria monocytogenes	91114	89643	1639
species	Neisseria meningitidis	82928	72372	487
species	Methanobrevibacter smithii	36772	0	2173
species	Pseudomonas aeruginosa	34162	32121	287
species	Enterococcus faecalis	23174	15256	1351
species	Bacillus cereus	22467	12453	1396
species	Escherichia coli	18730	18524	562
species	Streptococcus agalactiae	4223	3867	1311
species	Lactobacillus gasseri	1350	0	1596
species	Stenotrophomonas maltophilia	658	297	40324
species	Serratia marcescens	501	3	615
species	Staphylococcus warneri	229	0	1292
species	Staphylococcus aureus subsp. aureus MSHR1132	149	149	985002
species	Corynebacterium variabile	149	0	1727
species	Staphylococcus haemolyticus	113	0	1283
species	Deinococcus gobiensis	113	0	502394
species	Streptococcus suis	94	0	1307
species	Acinetobacter oleivorans	69	0	1148157
species	Acinetobacter calcoaceticus	67	0	471
species	Deinococcus proteolyticus	66	0	55148
species	Enterobacteria phage phiX174 sensu lato	51	51	374840
species	Rhodococcus erythropolis	39	30	1833
species	Burkholderia mallei	39	35	13373
species	Deinococcus geothermalis	37	0	68909
species	Staphylococcus phage 53 sensu lato	34	4	386445
species	Rothia dentocariosa	33	0	2047
species	Neisseria gonorrhoeae	33	20	485
species	Brachybacterium faecium	30	0	43669
species	Jonesia denitrificans	29	0	43674
species	Beutenbergia cavernae	29	0	84757
species	Bacillus thuringiensis	27	4	1428
species	Corynebacterium argentoratense	25	0	42817
species	Streptococcus pseudopneumoniae	25	0	257758
species	Staphylococcus phage phiETA3	24	24	326037
species	Neisseria lactamica	24	0	486
species	Nakamurella multipartita	23	0	53461
species	Deinococcus maricopensis	21	0	309887
species	Microbacterium testaceum	21	0	2033
species	Micrococcus luteus	21	0	1270
species	Corynebacterium kroppenstedtii	20	0	161879
species	Kytococcus sedentarius	20	0	1276
species	Sanguibacter keddieii	20	0	60920
species	Streptococcus mitis	20	0	28037
species	Propionibacterium propionicum	19	0	1750
species	Actinoplanes friuliensis	19	0	196914
species	Xylanimonas cellulosilytica	18	0	186189
species	[Cellvibrio] gilvus	17	0	11
species	Deinococcus peraridilitoris	16	0	432329
species	Stackebrandtia nassauensis	16	0	283811
species	Cellulomonas fimi	15	0	1708
species	Clavibacter michiganensis	15	2	28447
species	Propionibacterium acidipropionici	14	0	1748
species	Propionibacterium avidum	14	0	33010
species	Staphylococcus lugdunensis	14	14	28035
species	Staphylococcus phage phiETA	14	14	106284
species	Isoptericola variabilis	12	0	139208
species	Intrasporangium calvum	12	0	53358
species	Pseudomonas phage D3112	12	12	10708
species	Bifidobacterium longum	12	6	216816
species	Staphylococcus phage 29	12	12	320846
species	Kribbella flavida	11	0	182640
species	Kineococcus radiotolerans	11	0	131568
species	Saccharomonospora viridis	11	0	1852
species	Staphylococcus pasteuri	10	0	45972
species	Shigella boydii	10	5	621
species	Nocardioides sp. JS614	10	10	196162
species	Shigella flexneri	10	9	623
species	Bifidobacterium bifidum	9	9	1681
species	Rothia mucilaginosa	9	0	43675
species	Streptococcus oralis	9	0	1303
species	Deinococcus deserti	9	0	310783
species	Pseudomonas stutzeri	9	2	316
species	Ralstonia pickettii	9	3	329
species	Comamonas testosteroni	9	0	285
species	Nocardiopsis dassonvillei	8	0	2014
species	Arthrobacter sp. FB24	8	8	290399
species	Odoribacter splanchnicus	8	0	28118
species	Streptomyces avermitilis	8	0	33903
species	Streptosporangium roseum	8	0	2001
species	Staphylococcus phage X2	8	8	320850
species	Amycolatopsis mediterranei	8	8	33910
species	Acidovorax sp. KKS102	8	8	358220
species	Streptomyces griseus	8	0	1911
species	Listeria welshimeri	8	0	1643
species	Mobiluncus curtisii	7	0	2051
species	Kocuria rhizophila	7	0	72000
species	Rhodococcus jostii	7	0	132919
species	Shigella dysenteriae	7	0	622
species	Listeria innocua	7	0	1642
species	Streptomyces hygroscopicus	7	0	1912
species	Nocardiopsis alba	7	0	53437
species	Arthrobacter phenanthrenivorans	7	0	361575
species	Mycobacterium rhodesiae	7	0	36814
species	Shigella sonnei	7	6	624
species	Frankia sp. EAN1pec	7	7	298653
species	Geodermatophilus obscurus	7	0	1861
species	Helicobacter acinonychis	7	0	212
species	Staphylococcus phage 85	7	7	59506
species	Bifidobacterium adolescentis	7	0	1680
species	Corynebacterium maris	7	0	575200
species	Ralstonia solanacearum	6	1	305
species	Salinispora arenicola	6	0	168697
species	Corynebacterium glutamicum	6	6	1718
species	Clostridium saccharoperbutylacetonicum	6	0	36745
species	Actinosynnema mirum	6	0	40567
species	Pseudomonas denitrificans	6	0	43306
species	Nocardia farcinica	6	0	37329
species	Citrobacter rodentium	6	0	67825
species	Cellulomonas flavigena	6	0	1711
species	Thermus scotoductus	6	0	37636
species	Tsukamurella paurometabola	6	0	2061
species	Paenibacillus mucilaginosus	6	0	61624
species	Enterobacter cloacae	6	0	550
species	Desulfovibrio magneticus	6	0	184917
species	Leifsonia xyli	6	0	1575
species	Streptomyces albus	6	0	1888
species	Prevotella dentalis	6	0	52227
species	Streptomyces coelicolor	6	0	1902
species	Salmonella enterica	6	0	28901
species	Frankia sp. EuI1c	5	5	298654
species	Frankia symbiont of Datisca glomerata	5	5	656024
species	Kitasatospora setae	5	0	2066
species	Thiomonas intermedia	5	0	926
species	Saccharopolyspora erythraea	5	0	1836
species	Mycobacterium neoaurum	5	0	1795
species	Bacillus weihenstephanensis	5	0	86662
species	Pseudonocardia dioxanivorans	5	0	240495
species	Corynebacterium terpenotabidum	5	0	89154
species	Thermomonospora curvata	5	0	2020
species	Staphylococcus saprophyticus	5	0	29385
species	Rhodococcus equi	5	0	43767
species	Escherichia fergusonii	5	0	564
species	Renibacterium salmoninarum	5	0	1646
species	Streptomyces bingchenggensis	5	0	379067
species	Staphylococcus phage phiETA2	5	5	326036
species	Gordonia polyisoprenivorans	4	0	84595
species	Oscillibacter valericigenes	4	0	351091
species	Corynebacterium jeikeium	4	0	38289
species	Segniliparus rotundus	4	0	286802
species	Paracoccus denitrificans	4	0	266
species	Candidatus Liberibacter asiaticus	4	0	34021
species	Pseudomonas putida	4	0	303
species	Clostridium saccharobutylicum	4	0	169679
species	Haemophilus influenzae	4	4	727
species	Propionibacterium freudenreichii	4	0	1744
species	Tistrella mobilis	4	0	171437
species	Acidovorax sp. JS42	4	4	232721
species	Mycobacterium abscessus	4	4	36809
species	Catenulispora acidiphila	4	0	304895
species	Achromobacter xylosoxidans	4	1	85698
species	Gordonia sp. KTR9	4	4	337191
species	Enterobacter lignolyticus	4	0	1334193
species	Actinoplanes sp. N902-109	4	4	649831
species	Edwardsiella ictaluri	4	0	67780
species	Myxococcus stipitatus	4	0	83455
species	Mycoplasma hyopneumoniae	4	0	2099
species	Bacillus toyonensis	4	0	155322
species	Atopobium parvulum	4	0	1382
species	Bradyrhizobium sp. BTAi1	4	4	288000
species	Sphingomonas sp. MM-1	4	4	745310
species	Streptomyces cattleya	4	0	29303
species	Herbaspirillum seropedicae	4	0	964
species	Sorangium cellulosum	3	0	56
species	Mesorhizobium ciceri	3	0	39645
species	Bacillus anthracis	3	3	1392
species	Rhodopseudomonas palustris	3	1	1076
species	Enterococcus sp. 7L76	3	3	657310
species	Staphylococcus pseudintermedius	3	2	283734
species	Arthrobacter arilaitensis	3	0	256701
species	Edwardsiella tarda	3	3	636
species	Serratia plymuthica	3	1	82996
species	Bacillus amyloliquefaciens	3	0	1390
species	Gordonibacter pamelaeae	3	0	471189
species	Amycolatopsis orientalis	3	0	31958
species	Porphyromonas gingivalis	3	2	837
species	Thermobifida fusca	3	0	2021
species	Streptococcus parasanguinis	3	0	1318
species	Bacteroides salanitronis	3	0	376805
species	Bacteroides thetaiotaomicron	3	0	818
species	Klebsiella oxytoca	3	2	571
species	Staphylococcus phage 69	3	3	320834
species	Enterobacter asburiae	3	0	61645
species	Methylocystis sp. SC2	3	3	187303
species	Bacillus cytotoxicus	3	0	580165
species	Acinetobacter sp. ADP1	3	3	62977
species	Pseudomonas fluorescens	3	0	294
species	Alicyclobacillus acidocaldarius	3	0	405212
species	Corynebacterium halotolerans	3	0	225326
species	Nocardia cyriacigeorgica	3	0	135487
species	Fretibacterium fastidiosum	3	3	651822
species	Desulfotomaculum kuznetsovii	3	0	58135
species	Corynebacterium resistens	3	0	258224
species	Sinorhizobium fredii	3	1	380
species	Pseudomonas resinovorans	3	0	53412
species	Streptococcus intermedius	3	1	1338
species	Arcanobacterium haemolyticum	3	0	28264
species	Polaromonas naphthalenivorans	2	0	216465
species	Bifidobacterium thermophilum	2	0	33905
species	Rubrivivax gelatinosus	2	0	28068
species	Mycobacterium sp. JDM601	2	2	875328
species	Bordetella petrii	2	0	94624
species	Streptococcus sanguinis	2	0	1305
species	Burkholderia cenocepacia	2	0	95486
species	Rhodobacter capsulatus	2	0	1061
species	Streptomyces fulvissimus	2	0	68202
species	Wolbachia endosymbiont of Brugia malayi	2	0	80849
species	Haliangium ochraceum	2	0	80816
species	Streptococcus salivarius	2	1	1304
species	Streptococcus gordonii	2	0	1302
species	Myxococcus fulvus	2	0	33
species	Methylobacterium radiotolerans	2	0	31998
species	Lactobacillus buchneri	2	0	1581
species	Variovorax paradoxus	2	2	34073
species	Rhizobium leguminosarum	2	0	384
species	Pseudoxanthomonas suwonensis	2	0	314722
species	Dinoroseobacter shibae	2	0	215813
species	Sulfuricella denitrificans	2	0	649841
species	Dechloromonas aromatica	2	0	259537
species	Streptococcus thermophilus	2	1	1308
species	Truepera radiovictrix	2	0	332249
species	Staphylococcus phage tp310-2	2	2	445516
species	candidate division SR1 bacterium RAAC1_SR1_1	2	2	1394709
species	Carnobacterium maltaromaticum	2	0	2751
species	Treponema brennaborense	2	0	81028
species	Citrobacter koseri	2	0	545
species	Enterobacteriaceae bacterium strain FGI 57	2	2	693444
species	Bacteroides xylanisolvens	2	0	371601
species	Rubrobacter xylanophilus	2	0	49319
species	Bifidobacterium animalis	2	1	28025
species	Staphylococcus phage tp310-3	2	2	445517
species	Brucella melitensis	2	0	29459
species	Xanthomonas campestris	2	2	339
species	Micromonospora sp. L5	2	2	648999
species	Bacillus subtilis	2	0	1423
species	Hahella chejuensis	2	0	158327
species	Anaeromyxobacter sp. Fw109-5	2	2	404589
species	Erwinia billingiae	2	0	182337
species	Saccharothrix espanaensis	2	0	103731
species	Corallococcus coralloides	2	0	184914
species	Mycobacterium smegmatis	2	0	1772
species	Prevotella ruminicola	2	0	839
species	Actinoplanes missouriensis	2	0	1866
species	Pelagibacterium halotolerans	2	0	531813
species	Clostridium perfringens	2	1	1502
species	Cronobacter sakazakii	2	1	28141
species	Listeria seeligeri	2	0	1640
species	Mesorhizobium loti	1	0	381
species	Bacillus cellulosilyticus	1	0	1413
species	Eubacterium rectale	1	0	39491
species	Haemophilus parainfluenzae	1	0	729
species	Cupriavidus taiwanensis	1	0	164546
species	Legionella pneumophila	1	0	446
species	Rhizobium etli	1	1	29449
species	Calothrix parietina	1	0	32054
species	Pseudoxanthomonas spadix	1	0	415229
species	Lactobacillus plantarum	1	0	1590
species	Zymomonas mobilis	1	1	542
species	Sulfurovum sp. NBC37-1	1	1	387093
species	Enterobacter aerogenes	1	1	548
species	Pseudoalteromonas atlantica	1	0	288
species	Geobacter bemidjiensis	1	0	225194
species	Bradyrhizobium diazoefficiens	1	0	1355477
species	Clostridium cellulolyticum	1	0	1521
species	Leuconostoc carnosum	1	0	1252
species	Rhodomicrobium vannielii	1	0	1069
species	Hyphomicrobium sp. MC1	1	1	717785
species	Frateuria aurantia	1	0	81475
species	Thermodesulfobium narugense	1	0	184064
species	Ketogulonicigenium vulgare	1	1	92945
species	Finegoldia magna	1	0	1260
species	Acidovorax avenae	1	0	80867
species	Phycisphaera mikurensis	1	0	547188
species	Brevundimonas subvibrioides	1	0	74313
species	Hyposoter fugitivus ichnovirus	1	1	265522
species	Mycobacterium chubuense	1	0	1800
species	Solibacillus silvestris	1	0	76853
species	Candidatus Carsonella ruddii	1	1	114186
species	Acidimicrobium ferrooxidans	1	0	53635
species	Acidovorax ebreus	1	0	721785
species	Bradyrhizobium sp. S23321	1	1	335659
species	Geobacillus thermoglucosidasius	1	0	1426
species	Meiothermus ruber	1	0	277
species	Alteromonas sp. SN2	1	1	715451
species	Agrobacterium sp. H13-3	1	1	861208
species	Lactobacillus delbrueckii	1	0	1584
species	Burkholderia xenovorans	1	0	36873
species	Psychrobacter sp. PRwf-1	1	1	349106
species	Pseudomonas mendocina	1	0	300
species	Sodalis glossinidius	1	0	63612
species	Sphingobium japonicum	1	0	332056
species	Geobacillus sp. GHH01	1	1	1233873
species	Xanthomonas albilineans	1	0	29447
species	Methylobacterium extorquens	1	0	408
species	Roseiflexus sp. RS-1	1	1	357808
species	Ilumatobacter coccineus	1	0	467094
species	Sphaerochaeta pleomorpha	1	0	1131707
species	Acetobacter pasteurianus	1	1	438
species	Bifidobacterium dentium	1	0	1689
species	Pandoraea pnomenusa	1	0	93220
species	Verminephrobacter eiseniae	1	0	364317
species	Stigmatella aurantiaca	1	0	41
species	Granulicella mallensis	1	0	940614
species	Mycobacterium avium	1	1	1764
species	Proteus mirabilis	1	1	584
species	Burkholderia sp. CCGE1003	1	1	640512
species	Hyphomicrobium nitrativorans	1	0	1427356
species	Streptomyces scabiei	1	0	1930
species	Candidatus Nitrospira defluvii	1	1	330214
species	Ramlibacter tataouinensis	1	0	94132
species	Gloeobacter violaceus	1	0	33072
species	Dickeya dadantii	1	0	204038
species	Caulobacter sp. K31	1	1	366602
species	Brevibacillus brevis	1	0	1393
species	Pedobacter saltans	1	0	151895
species	Fervidobacterium nodosum	1	0	2424
species	Spiroplasma syrphidicola	1	0	216945
species	Klebsiella pneumoniae	1	1	573
species	Streptococcus phage EJ-1	1	1	12402
species	Desulfovibrio africanus	1	0	873
species	Xanthobacter autotrophicus	1	0	280
species	Coprothermobacter proteolyticus	1	0	35786
species	Thioalkalivibrio sp. K90mix	1	1	396595
species	Leptothrix cholodnii	1	0	34029
species	Mycobacterium kansasii	1	0	1768
species	Pseudomonas sp. VLB120	1	1	69328
species	Megasphaera elsdenii	1	0	907
species	Mycobacterium tuberculosis	1	0	1773
species	Rhodospirillum centenum	1	0	34018
species	Macacine herpesvirus 1	1	1	10325
species	Amphibacillus xylanus	1	0	1449
species	Prevotella melaninogenica	1	0	28132
species	Streptococcus dysgalactiae	1	0	1334
species	Arthrobacter chlorophenolicus	1	0	85085
species	Bacteriovorax marinus	1	0	97084
species	Buchnera aphidicola	1	0	9
species	Glaciecola sp. 4H-3-7+YE-5	1	1	983545
species	Pseudomonas protegens	1	1	380021
species	Corynebacterium aurimucosum	1	0	169292
species	Parvibaculum lavamentivorans	1	0	256618
species	Novosphingobium aromaticivorans	1	0	48935
species	Flexibacter litoralis	1	0	999
species	Pasteurella multocida	1	0	747
species	Enterobacter sp. R4-368	1	1	1166130
species	Serratia proteamaculans	1	0	28151
species	Streptococcus uberis	1	0	1349
species	Macrococcus caseolyticus	1	0	69966
species	Salinispora tropica	1	0	168695
species	Allochromatium vinosum	1	0	1049
species	Coxiella burnetii	1	1	777
species	Singulisphaera acidiphila	1	0	466153
species	Psychrobacter arcticus	1	0	334543
species	Burkholderia multivorans	1	0	87883
species	Spirosoma linguale	1	0	108
species	Agrobacterium tumefaciens	1	0	358
species	Shewanella sp. ANA-3	1	1	94122
species	Vibrio anguillarum	1	0	55601
species	Desulfovibrio salexigens	1	0	880
species	Eubacterium siraeum	1	0	39492
species	Flavobacterium johnsoniae	1	0	986
species	Francisella tularensis	1	0	263
species	Wolbachia endosymbiont of Drosophila melanogaster	1	1	163164
species	Paenibacillus polymyxa	1	1	1406
species	Pseudomonas fulva	1	0	47880
species	Lactobacillus sanfranciscensis	1	0	1625
species	Cupriavidus pinatubonensis	1	0	248026
species	Frankia sp. CcI3	1	1	106370
species	Hyphomicrobium denitrificans	1	0	53399
species	Desulfovibrio vulgaris	1	0	881
species	Bacillus pumilus	1	0	1408
species	Bacillus sp. 1NLA3E	1	1	666686
species	Maruca vitrata nucleopolyhedrovirus	1	1	1307954
species	Pelobacter carbinolicus	1	0	19
species	Rhodospirillum photometricum	1	0	1084
species	Thioalkalivibrio sulfidophilus	1	0	1033854
species	Meiothermus silvanus	1	0	52022
species	Listeria ivanovii	1	0	1638
species	Thermaerobacter marianensis	1	0	73919
species	Candidatus Azobacteroides pseudotrichonymphae	1	0	511435
species	Rhizobium sp. IRBG74	1	1	424182
species	Taylorella equigenitalis	1	0	29575
species	Burkholderia glumae	1	0	337
species	Pseudomonas poae	1	0	200451
species	Saccharophagus degradans	1	0	86304
species	Natrinema pellirubrum	1	0	69525
species	Xenorhabdus nematophila	1	0	628
species	Gemmatimonas aurantiaca	1	0	173480
species	Enterococcus hirae	1	0	1354
species	Candidatus Tremblaya princeps	1	1	189385
subspecies	Staphylococcus aureus subsp. aureus	12814	8144	46170
subspecies	Clavibacter michiganensis subsp. michiganensis	11	0	33013
subspecies	Nocardiopsis dassonvillei subsp. dassonvillei	8	0	568208
subspecies	Streptomyces griseus subsp. griseus	8	0	67263
subspecies	Streptomyces hygroscopicus subsp. jinggangensis	7	7	311982
subspecies	Staphylococcus saprophyticus subsp. saprophyticus	5	0	147452
subspecies	Bifidobacterium longum subsp. infantis	5	0	1682
subspecies	Salmonella enterica subsp. enterica	5	1	59201
subspecies	Leifsonia xyli subsp. xyli	4	0	59736
subspecies	Propionibacterium freudenreichii subsp. shermanii	4	0	1752
subspecies	Enterobacter cloacae subsp. cloacae	3	0	336306
subspecies	Alicyclobacillus acidocaldarius subsp. acidocaldarius	3	3	1388
subspecies	Leifsonia xyli subsp. cynodontis	2	0	31966
subspecies	Clavibacter michiganensis subsp. sepedonicus	2	2	31964
subspecies	Bifidobacterium longum subsp. longum	1	0	1679
subspecies	Bifidobacterium animalis subsp. lactis	1	1	302911
subspecies	Acidovorax avenae subsp. avenae	1	0	80870
subspecies	Legionella pneumophila subsp. pneumophila	1	1	91891
subspecies	Lactobacillus plantarum subsp. plantarum	1	0	337330
subspecies	Pasteurella multocida subsp. multocida	1	0	44283
subspecies	Enterobacter cloacae subsp. dissolvens	1	0	69219
subspecies	Leuconostoc gasicomitatum	1	0	115778
subspecies	Lactobacillus delbrueckii subsp. bulgaricus	1	1	1585
subspecies	Bacillus subtilis subsp. subtilis	1	0	135461
subspecies	Salmonella enterica subsp. arizonae	1	0	59203
subspecies	Francisella tularensis subsp. holarctica	1	0	119857
subspecies	Listeria ivanovii subsp. ivanovii	1	0	202751
subspecies	Streptococcus dysgalactiae subsp. equisimilis	1	0	119602
strain	Deinococcus radiodurans R1	1875669	1875669	243230
strain	Bacteroides vulgatus ATCC 8482	484285	484285	435590
strain	Actinobacteridae	209879	116	85003
strain	Clostridium beijerinckii NCIMB 8052	200109	200109	290402
strain	Acinetobacter baumannii ATCC 17978	166632	166632	400667
strain	Staphylococcus epidermidis ATCC 12228	67411	67411	176280
strain	Rhodobacter sphaeroides 2.4.1	63927	63927	272943
strain	Methanobrevibacter smithii ATCC 35061	36772	36772	420247
strain	Neisseria meningitidis serogroup B	10500	9399	491
strain	Streptococcus mutans UA159	10351	10351	210007
strain	Bacillus cereus ATCC 10987	9980	9980	222523
strain	Streptococcus pneumoniae TIGR4	9814	9814	170187
strain	Enterococcus faecalis OG1RF	7906	7906	474186
strain	Pseudomonas aeruginosa PAO1	1962	1962	208964
strain	Staphylococcus aureus subsp. aureus CN1	1466	1466	1193576
strain	Listeria monocytogenes EGD-e	1459	1459	169963
strain	Lactobacillus gasseri ATCC 33323	1350	1350	324831
strain	Propionibacterium acnes KPA171202	1160	1160	267747
strain	Neisseria meningitidis MC58	1087	1087	122586
strain	Staphylococcus aureus subsp. aureus 11819-97	846	846	1123523
strain	Staphylococcus aureus subsp. aureus JKD6159	681	681	869816
strain	Acinetobacter baumannii BJAB0715	636	636	1096996
strain	Serratia marcescens WW4	492	492	435998
strain	Staphylococcus aureus subsp. aureus ED133	474	474	685039
strain	Staphylococcus aureus subsp. aureus HO 5096 0412	429	429	1074252
strain	Streptococcus agalactiae 2603V/R	343	343	208435
strain	Acinetobacter baumannii ZW85-1	257	257	1400867
strain	Staphylococcus warneri SG1	229	229	1194526
strain	Acinetobacter baumannii D1279779	226	226	945556
strain	Stenotrophomonas maltophilia K279a	200	200	522373
strain	Staphylococcus aureus subsp. aureus 6850	187	187	1392476
strain	Staphylococcus epidermidis RP62A	186	186	176279
strain	Escherichia coli K-12	161	161	83333
strain	Staphylococcus aureus CA-347	160	160	1323661
strain	Corynebacterium variabile DSM 44702	149	149	858619
strain	Staphylococcus aureus RF122	130	130	273036
strain	Staphylococcus aureus subsp. aureus LGA251	127	127	985006
strain	Deinococcus gobiensis I-0	113	113	745776
strain	Staphylococcus haemolyticus JCSC1435	113	113	279808
strain	Staphylococcus aureus subsp. aureus ED98	99	99	681288
strain	Acinetobacter baumannii SDF	92	92	509170
strain	Acinetobacter baumannii AB0057	90	90	480119
strain	Propionibacterium acnes ATCC 11828	84	84	1091045
strain	Streptococcus suis JS14	78	78	945704
strain	Rhodobacter sphaeroides KD131	73	73	557760
strain	Staphylococcus aureus subsp. aureus MRSA252	70	70	282458
strain	Acinetobacter oleivorans DR1	69	69	436717
strain	Acinetobacter calcoaceticus PHEA-2	67	67	871585
strain	Staphylococcus aureus Bmb9393	67	67	1321369
strain	Deinococcus proteolyticus MRP	66	66	693977
strain	Stenotrophomonas maltophilia R551-3	64	64	391008
strain	Helicobacter pylori 26695	57	57	85962
strain	Stenotrophomonas maltophilia D457	55	55	1163399
strain	Rhodobacter sphaeroides ATCC 17029	49	49	349101
strain	Stenotrophomonas maltophilia JV3	42	42	868597
strain	Staphylococcus aureus subsp. aureus VC40	41	41	1028799
strain	Pseudomonas aeruginosa B136-33	37	37	1280938
strain	Deinococcus geothermalis DSM 11300	37	37	319795
strain	Rothia dentocariosa ATCC 17931	33	33	762948
strain	Brachybacterium faecium DSM 4810	30	30	446465
strain	Jonesia denitrificans DSM 20603	29	29	471856
strain	Staphylococcus aureus subsp. aureus str. JKD6008	29	29	546342
strain	Beutenbergia cavernae DSM 12333	29	29	471853
strain	Rhodobacter sphaeroides ATCC 17025	28	28	349102
strain	Corynebacterium argentoratense DSM 44202	25	25	1348662
strain	Streptococcus pseudopneumoniae IS7493	25	25	1054460
strain	Neisseria lactamica 020-06	24	24	489653
strain	Staphylococcus aureus subsp. aureus MSSA476	24	24	282459
strain	Bacillus cereus FRI-35	24	24	1217984
strain	Nakamurella multipartita DSM 44233	23	23	479431
strain	Pseudomonas aeruginosa PA7	22	22	381754
strain	Deinococcus maricopensis DSM 21211	21	21	709986
strain	Microbacterium testaceum StLB037	21	21	979556
strain	Micrococcus luteus NCTC 2665	21	21	465515
strain	Helicobacter pylori B8	21	21	693745
strain	Corynebacterium kroppenstedtii DSM 44385	20	20	645127
strain	Neisseria meningitidis serogroup C	20	1	135720
strain	Sanguibacter keddieii DSM 10542	20	20	446469
strain	Streptococcus mitis B6	20	20	365659
strain	Kytococcus sedentarius DSM 20547	20	20	478801
strain	Staphylococcus aureus subsp. aureus USA300	19	19	367830
strain	Helicobacter pylori Lithuania75	19	19	907237
strain	Propionibacterium propionicum F0230a	19	19	767029
strain	Actinoplanes friuliensis DSM 7358	19	19	1246995
strain	Xylanimonas cellulosilytica DSM 15894	18	18	446471
strain	[Cellvibrio] gilvus ATCC 13127	17	17	593907
strain	Stackebrandtia nassauensis DSM 44728	16	16	446470
strain	Deinococcus peraridilitoris DSM 19664	16	16	937777
strain	Acinetobacter baumannii BJAB0868	15	15	1096997
strain	Helicobacter pylori SNT49	15	15	1055530
strain	Cellulomonas fimi ATCC 484	15	15	590998
strain	Helicobacter pylori India7	14	14	907238
strain	Propionibacterium acidipropionici ATCC 4875	14	14	1171373
strain	Propionibacterium avidum 44067	14	14	1170318
strain	Acinetobacter baumannii TYTH-1	13	13	1100841
strain	Helicobacter pylori Gambia94/24	13	13	907240
strain	Helicobacter pylori 52	12	12	684950
strain	Intrasporangium calvum DSM 43043	12	12	710696
strain	Streptococcus pneumoniae 70585	12	12	488221
strain	Neisseria meningitidis 053442	12	12	374833
strain	Neisseria meningitidis M01-240355	12	12	935588
strain	Isoptericola variabilis 225	12	12	743718
strain	Streptococcus suis D12	12	12	1004952
strain	Pseudomonas aeruginosa M18	11	11	941193
strain	Clavibacter michiganensis subsp. michiganensis NCPPB 382	11	11	443906
strain	Helicobacter pylori SouthAfrica20	11	11	1352356
strain	Kineococcus radiotolerans SRS30216 = ATCC BAA-149	11	11	266940
strain	Escherichia coli O127:H6 str. E2348/69	11	11	574521
strain	Neisseria meningitidis H44/76	11	11	909420
strain	Kribbella flavida DSM 17836	11	11	479435
strain	Streptococcus agalactiae ILRI005	11	11	1309807
strain	Acinetobacter baumannii BJAB07104	11	11	1096995
strain	Helicobacter pylori SouthAfrica7	11	11	907239
strain	Saccharomonospora viridis DSM 43017	11	11	471857
strain	Staphylococcus pasteuri SP1	10	10	1276282
strain	Helicobacter pylori G27	10	10	563041
strain	Helicobacter pylori Aklavik86	9	9	1055532
strain	Helicobacter pylori J99	9	9	85963
strain	Streptococcus pneumoniae G54	9	9	512566
strain	Helicobacter pylori 908	9	8	869727
strain	Deinococcus deserti VCD115	9	9	546414
strain	Rothia mucilaginosa DY-18	9	9	680646
strain	Streptococcus pneumoniae SPNA45	9	9	869309
strain	Streptococcus oralis Uo5	9	9	927666
strain	Bacillus thuringiensis MC28	9	9	1195464
strain	Comamonas testosteroni CNB-2	9	9	688245
strain	Neisseria meningitidis alpha14	9	9	662598
strain	Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111	8	8	446468
strain	Streptomyces griseus subsp. griseus NBRC 13350	8	8	455632
strain	Helicobacter pylori HPAG1	8	8	357544
strain	Streptosporangium roseum DSM 43021	8	8	479432
strain	Helicobacter pylori PeCan18	8	8	1163742
strain	Odoribacter splanchnicus DSM 220712	8	8	709991
strain	Escherichia coli UMN026	8	8	585056
strain	Bacillus thuringiensis serovar finitimus YBT-020	8	8	930170
strain	Streptomyces avermitilis MA-4680 = NBRC 14893	8	8	227882
strain	Neisseria meningitidis M04-240196	8	8	935593
strain	Listeria welshimeri serovar 6b str. SLCC5334	8	8	386043
strain	Streptococcus mutans GS-5	8	8	1198676
strain	Staphylococcus aureus subsp. aureus TCH60	8	8	548473
strain	Neisseria gonorrhoeae TCDC-NG08107	8	8	940296
strain	Mycobacterium rhodesiae NBB3	7	7	710685
strain	Kocuria rhizophila DC2201	7	7	378753
strain	Helicobacter acinonychis str. Sheeba	7	7	382638
strain	Streptococcus pneumoniae 670-6B	7	7	189423
strain	Corynebacterium maris DSM 45190	7	7	1224163
strain	Nocardiopsis alba ATCC BAA-2165	7	7	1205910
strain	Shigella dysenteriae Sd197	7	7	300267
strain	Arthrobacter phenanthrenivorans Sphe3	7	7	930171
strain	Helicobacter pylori HUP-B14	7	7	1163743
strain	Mobiluncus curtisii ATCC 43063	7	7	548479
strain	Helicobacter pylori Aklavik117	7	7	1055531
strain	Geodermatophilus obscurus DSM 43160	7	7	526225
strain	Helicobacter pylori 83	7	7	585538
strain	Listeria innocua Clip11262	7	7	272626
strain	Bifidobacterium adolescentis ATCC 15703	7	7	367928
strain	Helicobacter pylori ELS37	7	7	1055527
strain	Staphylococcus aureus subsp. aureus MW2	7	7	196620
strain	Rhodococcus jostii RHA1	7	7	101510
strain	Pseudomonas denitrificans ATCC 13867	6	6	1294143
strain	Cellulomonas flavigena DSM 20109	6	6	446466
strain	Serratia marcescens FGI94	6	6	1249634
strain	Tsukamurella paurometabola DSM 20162	6	6	521096
strain	Helicobacter pylori B38	6	6	592205
strain	Helicobacter pylori UM037	6	6	1321939
strain	Prevotella dentalis DSM 3688	6	6	908937
strain	Clostridium saccharoperbutylacetonicum N1-4(HMT)	6	6	931276
strain	Listeria monocytogenes SLCC2376	6	6	882097
strain	Citrobacter rodentium ICC168	6	6	637910
strain	Streptomyces coelicolor A3(2)	6	6	100226
strain	Streptomyces albus J1074	6	6	457425
strain	Nocardia farcinica IFM 10152	6	6	247156
strain	Thermus scotoductus SA-01	6	6	743525
strain	Actinosynnema mirum DSM 43827	6	6	446462
strain	Helicobacter pylori P12	6	6	570508
strain	Paenibacillus mucilaginosus K02	6	6	997761
strain	Salinispora arenicola CNS-205	6	6	391037
strain	Helicobacter pylori F16	6	6	866344
strain	Desulfovibrio magneticus RS-1	6	6	573370
strain	Escherichia fergusonii ATCC 35469	5	5	585054
strain	Streptomyces bingchenggensis BCW-1	5	5	749414
strain	Escherichia coli ED1a	5	5	585397
strain	Helicobacter pylori PeCan4	5	5	765963
strain	Pseudonocardia dioxanivorans CB1190	5	5	675635
strain	Acinetobacter baumannii 1656-2	5	5	696749
strain	Rhodococcus equi 103S	5	5	685727
strain	Staphylococcus aureus subsp. aureus str. Newman	5	5	426430
strain	Streptococcus mutans NN2025	5	5	511691
strain	Saccharopolyspora erythraea NRRL 2338	5	5	405948
strain	Streptococcus pneumoniae INV104	5	5	869269
strain	Mycobacterium neoaurum VKM Ac-1815D	5	5	700508
strain	Thiomonas intermedia K12	5	5	75379
strain	Renibacterium salmoninarum ATCC 33209	5	5	288705
strain	Helicobacter pylori SJM180	5	5	765962
strain	Rhodococcus erythropolis PR4	5	5	234621
strain	Ralstonia pickettii 12D	5	5	428406
strain	Bacillus weihenstephanensis KBAB4	5	5	315730
strain	Thermomonospora curvata DSM 43183	5	5	471852
strain	Streptococcus pneumoniae AP200	5	5	574093
strain	Corynebacterium terpenotabidum Y-11	5	5	1200352
strain	Staphylococcus aureus 08BA02176	5	5	1229492
strain	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305	5	5	342451
strain	Ralstonia solanacearum PSI07	5	5	859657
strain	Bifidobacterium longum subsp. infantis ATCC 15697 = JCM 1222 = DSM 20088	5	5	391904
strain	Acinetobacter baumannii ACICU	5	5	405416
strain	Kitasatospora setae KM-6054	5	5	452652
strain	Leifsonia xyli subsp. xyli str. CTCB07	4	4	281090
strain	Tistrella mobilis KA081020-065	4	4	1110502
strain	Atopobium parvulum DSM 20469	4	4	521095
strain	Edwardsiella ictaluri 93-146	4	4	634503
strain	Catenulispora acidiphila DSM 44928	4	4	479433
strain	Herbaspirillum seropedicae SmR1	4	4	757424
strain	Neisseria meningitidis Z2491	4	4	122587
strain	Gordonia polyisoprenivorans VH2	4	4	1112204
strain	Helicobacter pylori Shi417	4	4	1163739
strain	Oscillibacter valericigenes Sjm18-20	4	4	693746
strain	Helicobacter pylori F30	4	4	866345
strain	Escherichia coli 042	4	4	216592
strain	Streptomyces cattleya NRRL 8057 = DSM 46488	4	4	1003195
strain	Helicobacter pylori OK310	4	4	1248726
strain	Helicobacter pylori Puno120	4	4	1055528
strain	Paracoccus denitrificans PD1222	4	4	318586
strain	Pseudomonas putida HB3267	4	4	1215088
strain	Pseudomonas stutzeri DSM 10701	4	4	1123519
strain	Myxococcus stipitatus DSM 14675	4	4	1278073
strain	Helicobacter pylori Shi470	4	4	512562
strain	Clostridium saccharobutylicum DSM 13864	4	4	1345695
strain	Propionibacterium acnes TypeIA2 P.acn31	4	4	1114969
strain	Streptococcus pneumoniae Hungary19A-6	4	4	487214
strain	Neisseria meningitidis 8013	4	4	604162
strain	Enterococcus faecalis 62	4	4	936153
strain	Bacillus cereus E33L	4	4	288681
strain	Enterobacter lignolyticus SCF1	4	4	701347
strain	Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1	4	4	754252
strain	Mycoplasma hyopneumoniae J	4	4	262719
strain	Rhodococcus erythropolis CCM2595	4	4	1136179
strain	Candidatus Liberibacter asiaticus str. gxpsy	4	4	1174529
strain	Bacillus toyonensis BCT-7112	4	4	1415784
strain	Propionibacterium acnes C1	4	4	1234380
strain	Enterococcus faecalis V583	4	4	226185
strain	Corynebacterium jeikeium K411	4	4	306537
strain	Segniliparus rotundus DSM 44985	4	4	640132
strain	Streptococcus mutans LJ23	4	4	1155071
strain	Helicobacter pylori F57	4	4	866346
strain	Helicobacter pylori v225d	4	4	637913
strain	Helicobacter pylori OK113	4	4	1248725
strain	Streptococcus pneumoniae P1031	4	4	488223
strain	Neisseria meningitidis alpha710	3	3	630588
strain	Bacteroides salanitronis DSM 18170	3	3	667015
strain	Bacillus thuringiensis serovar kurstaki str. HD73	3	3	1279365
strain	Bacteroides thetaiotaomicron VPI-5482	3	3	226186
strain	Amycolatopsis orientalis HCCB10007	3	3	1156913
strain	Mesorhizobium ciceri biovar biserrulae WSM1271	3	3	765698
strain	Propionibacterium acnes TypeIA2 P.acn17	3	3	1114967
strain	Corynebacterium resistens DSM 45100	3	3	662755
strain	Pseudomonas aeruginosa DK2	3	3	1093787
strain	Bacillus cereus F837/76	3	3	347495
strain	Thermobifida fusca YX	3	3	269800
strain	Gordonibacter pamelaeae 7-10-1-b	3	3	657308
strain	Shigella boydii CDC 3083-94	3	3	344609
strain	Streptococcus pneumoniae gamPNI0373	3	3	697283
strain	Streptococcus pneumoniae JJA	3	3	488222
strain	Helicobacter pylori Shi169	3	3	1163741
strain	Sorangium cellulosum So0157-2	3	3	1254432
strain	Enterobacter asburiae LF7a	3	3	640513
strain	Enterococcus faecalis D32	3	3	1206105
strain	Staphylococcus aureus subsp. aureus ST228	3	3	1074919
strain	Corynebacterium halotolerans YIM 70093 = DSM 44683	3	3	1121362
strain	Neisseria gonorrhoeae NCCP11945	3	3	521006
strain	Desulfotomaculum kuznetsovii DSM 6115	3	3	760568
strain	Streptococcus parasanguinis ATCC 15912	3	3	760570
strain	Bacillus cytotoxicus NVH 391-98	3	3	315749
strain	Neisseria meningitidis FAM18	3	3	272831
strain	Nocardia cyriacigeorgica GUH-2	3	3	1127134
strain	Helicobacter pylori F32	3	3	102608
strain	Arcanobacterium haemolyticum DSM 20595	3	3	644284
strain	Pseudomonas resinovorans NBRC 106553	3	3	1245471
strain	Arthrobacter arilaitensis Re117	3	3	861360
strain	Staphylococcus aureus M1	3	3	1305598
strain	Helicobacter pylori XZ274	3	3	1127122
strain	Helicobacter pylori Puno135	3	3	1055529
strain	Pelagibacterium halotolerans B2	2	2	1082931
strain	Rhodobacter capsulatus SB 1003	2	2	272942
strain	Saccharothrix espanaensis DSM 44229	2	2	1179773
strain	Escherichia coli O157:H7 str. EC4115	2	2	444450
strain	Streptococcus pneumoniae CGSP14	2	2	516950
strain	Acinetobacter baumannii AYE	2	2	509173
strain	Sulfuricella denitrificans skB26	2	2	1163617
strain	Listeria seeligeri serovar 1/2b str. SLCC3954	2	2	683837
strain	Methylobacterium radiotolerans JCM 2831	2	2	426355
strain	Carnobacterium maltaromaticum LMA28	2	2	1234679
strain	Citrobacter koseri ATCC BAA-895	2	2	290338
strain	Escherichia coli SMS-3-5	2	2	439855
strain	Escherichia coli ETEC H10407	2	2	316401
strain	Prevotella ruminicola 23	2	2	264731
strain	Acinetobacter baumannii MDR-ZJ06	2	2	497978
strain	Bacillus amyloliquefaciens XH7	2	2	1034836
strain	Treponema brennaborense DSM 12168	2	2	906968
strain	Escherichia coli O103:H2 str. 12009	2	2	585395
strain	Pseudomonas fluorescens Pf0-1	2	2	205922
strain	Myxococcus fulvus HW-1	2	2	483219
strain	Propionibacterium acnes SK137	2	2	553199
strain	Streptomyces fulvissimus DSM 40593	2	2	1303692
strain	Brucella melitensis NI	2	2	1029825
strain	Burkholderia mallei NCTC 10229	2	2	412022
strain	Pseudomonas aeruginosa UCBPP-PA14	2	2	208963
strain	Pseudomonas aeruginosa SCV20265	2	2	1427342
strain	Polaromonas naphthalenivorans CJ2	2	2	365044
strain	Enterobacter cloacae subsp. cloacae NCTC 9394	2	2	718254
strain	Rubrobacter xylanophilus DSM 9941	2	2	266117
strain	Wolbachia endosymbiont strain TRS of Brugia malayi	2	2	292805
strain	Rubrivivax gelatinosus IL144	2	2	983917
strain	Shigella boydii Sb227	2	2	300268
strain	Bacillus cereus Q1	2	2	361100
strain	Corallococcus coralloides DSM 2259	2	2	1144275
strain	Propionibacterium acnes 6609	2	2	1031709
strain	Bacillus thuringiensis serovar konkukian str. 97-27	2	2	281309
strain	Lactobacillus buchneri NRRL B-30929	2	2	511437
strain	Escherichia coli E24377A	2	2	331111
strain	Dinoroseobacter shibae DFL 12 = DSM 16493	2	2	398580
strain	Serratia plymuthica S13	2	2	1348660
strain	Bifidobacterium thermophilum RBL67	2	2	1254439
strain	Actinoplanes missouriensis 431	2	2	512565
strain	Truepera radiovictrix DSM 17093	2	2	649638
strain	Dechloromonas aromatica RCB	2	2	159087
strain	Erwinia billingiae Eb661	2	2	634500
strain	Helicobacter pylori Shi112	2	2	1163740
strain	Listeria monocytogenes J0161	2	2	393130
strain	Streptococcus intermedius B196	2	2	862967
strain	Helicobacter pylori 51	2	2	290847
strain	Burkholderia mallei NCTC 10247	2	2	320389
strain	Pseudoxanthomonas suwonensis 11-1	2	2	743721
strain	Haliangium ochraceum DSM 14365	2	2	502025
strain	Neisseria meningitidis WUE 2594	2	2	942513
strain	Leifsonia xyli subsp. cynodontis DSM 46306	2	2	1389489
strain	Bacteroides xylanisolvens XB1A	2	2	657309
strain	Streptococcus oligofermentans AS 1.3089	2	2	1302863
strain	Streptococcus pneumoniae ATCC 700669	2	2	561276
strain	Burkholderia cenocepacia J2315	2	2	216591
strain	Neisseria gonorrhoeae FA 1090	2	2	242231
strain	Propionibacterium acnes 266	2	2	909952
strain	Bordetella petrii DSM 12804	2	2	340100
strain	Hahella chejuensis KCTC 2396	2	2	349521
strain	Streptococcus gordonii str. Challis substr. CH1	2	2	467705
strain	Streptococcus sanguinis SK36	2	2	388919
strain	Enterobacter cloacae EcWSU1	2	2	1045856
strain	Leptothrix cholodnii SP-6	1	1	395495
strain	Ramlibacter tataouinensis TTB310	1	1	365046
strain	Acidovorax avenae subsp. avenae ATCC 19860	1	1	643561
strain	Streptococcus pneumoniae A026	1	1	1408179
strain	Lactobacillus sanfranciscensis TMW 1.1304	1	1	714313
strain	Prevotella melaninogenica ATCC 25845	1	1	553174
strain	Propionibacterium acnes HL096PA1	1	1	1134454
strain	Pseudomonas poae RE*1-1-14	1	1	1282356
strain	Streptococcus suis 98HAH33	1	1	391296
strain	Parvibaculum lavamentivorans DS-1	1	1	402881
strain	Staphylococcus aureus subsp. aureus COL	1	1	93062
strain	Fervidobacterium nodosum Rt17-B1	1	1	381764
strain	Frateuria aurantia DSM 6220	1	1	767434
strain	Taylorella equigenitalis ATCC 35865	1	1	743973
strain	Mycobacterium smegmatis str. MC2 155	1	1	246196
strain	Burkholderia multivorans ATCC 17616	1	1	395019
strain	Phycisphaera mikurensis NBRC 102666	1	1	1142394
strain	Eubacterium siraeum V10Sc8a	1	1	717961
strain	Streptococcus pneumoniae SPN034156	1	1	869303
strain	Flavobacterium johnsoniae UW101	1	1	376686
strain	Coprothermobacter proteolyticus DSM 5265	1	1	309798
strain	Psychrobacter arcticus 273-4	1	1	259536
strain	Pseudomonas stutzeri DSM 4166	1	1	996285
strain	Buchnera aphidicola BCc	1	1	372461
strain	Arthrobacter chlorophenolicus A6	1	1	452863
strain	Enterobacter cloacae subsp. cloacae ATCC 13047	1	1	716541
strain	Helicobacter pylori UM066	1	1	1321940
strain	Listeria monocytogenes SLCC2372	1	1	932920
strain	Bacillus pumilus SAFR-032	1	1	315750
strain	Achromobacter xylosoxidans A8	1	1	762376
strain	Brevibacillus brevis NBRC 100599	1	1	358681
strain	Lactobacillus plantarum subsp. plantarum P-8	1	1	767468
strain	Streptococcus agalactiae NEM316	1	1	211110
strain	Burkholderia glumae BGR1	1	1	626418
strain	Singulisphaera acidiphila DSM 18658	1	1	886293
strain	Pseudomonas aeruginosa RP73	1	1	1340851
strain	Rhizobium leguminosarum bv. trifolii WSM2304	1	1	395492
strain	Streptococcus thermophilus LMG 18311	1	1	264199
strain	Bacillus amyloliquefaciens subsp. plantarum AS43.3	1	1	1225788
strain	Brevundimonas subvibrioides ATCC 15264	1	1	633149
strain	Staphylococcus aureus subsp. aureus SA40	1	1	1194085
strain	Acinetobacter baumannii TCDC-AB0715	1	1	980514
strain	Spirosoma linguale DSM 74	1	1	504472
strain	Clostridium cellulolyticum H10	1	1	394503
strain	Streptococcus suis S735	1	1	1184252
strain	Cupriavidus taiwanensis LMG 19424	1	1	977880
strain	Streptococcus salivarius CCHSS3	1	1	1048332
strain	Ralstonia pickettii 12J	1	1	402626
strain	Listonella anguillarum serovar O1	1	1	42323
strain	Thermaerobacter marianensis DSM 12885	1	1	644966
strain	Bacillus thuringiensis HD-789	1	1	1217737
strain	Helicobacter pylori 2018	1	1	985080
strain	Finegoldia magna ATCC 29328	1	1	334413
strain	Rhodomicrobium vannielii ATCC 17100	1	1	648757
strain	Mycobacterium tuberculosis CAS/NITR204	1	1	1310114
strain	Desulfovibrio vulgaris str. 'Miyazaki F'	1	1	883
strain	Enterococcus faecalis str. Symbioflor 1	1	1	1261557
strain	Granulicella mallensis MP5ACTX8	1	1	682795
strain	Escherichia coli IAI39	1	1	585057
strain	Pseudoalteromonas atlantica T6c	1	1	342610
strain	Spiroplasma syrphidicola EA-1	1	1	1276229
strain	Acidovorax ebreus TPSY	1	1	535289
strain	Pseudomonas fulva 12-X	1	1	743720
strain	Mesorhizobium loti MAFF303099	1	1	266835
strain	Serratia proteamaculans 568	1	1	399741
strain	Salmonella enterica subsp. enterica serovar Newport str. USMARC-S3124.1	1	1	877468
strain	Ilumatobacter coccineus YM16-304	1	1	1313172
strain	Escherichia coli SE15	1	1	431946
strain	Salmonella enterica subsp. enterica serovar Cubana str. CFSAN002050	1	1	1271863
strain	Pedobacter saltans DSM 12145	1	1	762903
strain	Methylobacterium extorquens CM4	1	1	440085
strain	Streptococcus suis ST1	1	1	1004951
strain	Pseudomonas aeruginosa MTB-1	1	1	1415629
strain	Methanobacterium sp. AL-21	1	1	868132
strain	Geobacter bemidjiensis Bem	1	1	404380
strain	Porphyromonas gingivalis ATCC 33277	1	1	431947
strain	Cronobacter sakazakii CMCC 45402	1	1	1401659
strain	Rhodospirillum photometricum DSM 122	1	1	1150469
strain	Salinispora tropica CNB-440	1	1	369723
strain	Streptococcus pneumoniae ST556	1	1	1130804
strain	Bifidobacterium longum subsp. longum JDM301	1	1	759350
strain	Eubacterium rectale ATCC 33656	1	1	515619
strain	Bacteriovorax marinus SJ	1	1	862908
strain	Rhodopseudomonas palustris CGA009	1	1	258594
strain	Haemophilus parainfluenzae T3T1	1	1	862965
strain	Achromobacter xylosoxidans NH44784-1996	1	1	1167634
strain	Pseudomonas stutzeri ATCC 17588 = LMG 11199	1	1	96563
strain	Escherichia coli 536	1	1	362663
strain	Calothrix sp. PCC 6303	1	1	1170562
strain	Neisseria meningitidis G2136	1	1	935599
strain	Flexibacter litoralis DSM 6794	1	1	880071
strain	Meiothermus silvanus DSM 9946	1	1	526227
strain	Helicobacter pylori Cuz20	1	1	765964
strain	Dickeya dadantii 3937	1	1	198628
strain	Sphingobium japonicum UT26S	1	1	452662
strain	Allochromatium vinosum DSM 180	1	1	572477
strain	Acidimicrobium ferrooxidans DSM 10331	1	1	525909
strain	Sinorhizobium fredii NGR234	1	1	394
strain	Sinorhizobium fredii HH103	1	1	1117943
strain	Verminephrobacter eiseniae EF01-2	1	1	391735
strain	Thioalkalivibrio sulfidophilus HL-EbGr7	1	1	396588
strain	Helicobacter pylori 35A	1	1	585535
strain	Escherichia coli APEC O1	1	1	405955
strain	Bradyrhizobium diazoefficiens USDA 110	1	1	224911
strain	Macrococcus caseolyticus JCSC5402	1	1	458233
strain	Streptococcus suis T15	1	1	1340847
strain	Megasphaera elsdenii DSM 20460	1	1	1064535
strain	Gemmatimonas aurantiaca T-27	1	1	379066
strain	Staphylococcus pseudintermedius HKU10-03	1	1	937773
strain	Escherichia coli HS	1	1	331112
strain	Pelobacter carbinolicus DSM 2380	1	1	338963
strain	Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633	1	1	439843
strain	Salmonella enterica subsp. enterica serovar Agona str. 24249	1	1	1406860
strain	Listeria ivanovii subsp. ivanovii PAM 55	1	1	881621
strain	Enterobacter cloacae subsp. dissolvens SDM	1	1	1104326
strain	Enterococcus hirae ATCC 9790	1	1	768486
strain	Burkholderia xenovorans LB400	1	1	266265
strain	Natrinema pellirubrum DSM 15624	1	1	797303
strain	Sphaerochaeta pleomorpha str. Grapes	1	1	158190
strain	Pseudomonas mendocina ymp	1	1	399739
strain	Listeria monocytogenes SLCC2540	1	1	879089
strain	Candidatus Azobacteroides pseudotrichonymphae genomovar. CFP2	1	1	511995
strain	Pseudomonas fluorescens SBW25	1	1	216595
strain	Thermodesulfobium narugense DSM 14796	1	1	747365
strain	Xenorhabdus nematophila ATCC 19061	1	1	406817
strain	Staphylococcus aureus subsp. aureus T0131	1	1	1006543
strain	Agrobacterium radiobacter K84	1	1	311403
strain	Solibacillus silvestris StLB046	1	1	1002809
strain	Rhodospirillum centenum SW	1	1	414684
strain	Clostridium perfringens SM101	1	1	289380
strain	Rhizobium leguminosarum bv. trifolii WSM1325	1	1	395491
strain	Achromobacter xylosoxidans NBRC 15126 = ATCC 27061	1	1	1216976
strain	Stigmatella aurantiaca DW4/3-1	1	1	378806
strain	Hyphomicrobium denitrificans ATCC 51888	1	1	582899
strain	Staphylococcus aureus subsp. aureus NCTC 8325	1	1	93061
strain	Acinetobacter baumannii AB307-0294	1	1	557600
strain	Propionibacterium acnes TypeIA2 P.acn33	1	1	1114966
strain	Escherichia coli UMNK88	1	1	696406
strain	Helicobacter pylori Sat464	1	1	794851
strain	Mycobacterium kansasii ATCC 12478	1	1	557599
strain	Gloeobacter violaceus PCC 7421	1	1	251221
strain	Hyphomicrobium nitrativorans NL23	1	1	1029756
strain	Xanthobacter autotrophicus Py2	1	1	78245
strain	Listeria monocytogenes 08-5923	1	1	637381
strain	Listeria monocytogenes SLCC7179	1	1	879090
strain	Salmonella enterica subsp. arizonae serovar 62:z4,z23:- str. RSK2980	1	1	882884
strain	Pseudomonas stutzeri RCH2	1	1	644801
strain	Saccharophagus degradans 2-40	1	1	203122
strain	Bifidobacterium dentium Bd1	1	1	401473
strain	Leuconostoc gasicomitatum LMG 18811	1	1	762550
strain	Xanthomonas albilineans GPE PC73	1	1	380358
strain	Bacillus subtilis subsp. subtilis str. BAB-1	1	1	1302650
strain	Novosphingobium aromaticivorans DSM 12444	1	1	279238
strain	Shigella flexneri 2a str. 301	1	1	198214
strain	Pandoraea pnomenusa 3kgm	1	1	1416914
strain	Escherichia coli 55989	1	1	585055
strain	Corynebacterium aurimucosum ATCC 700975	1	1	548476
strain	Klebsiella oxytoca KCTC 1686	1	1	1006551
strain	Desulfovibrio salexigens DSM 2638	1	1	526222
strain	Pseudoxanthomonas spadix BD-a59	1	1	1045855
strain	Amphibacillus xylanus NBRC 15112	1	1	698758
strain	Bacillus cellulosilyticus DSM 2522	1	1	649639
strain	Ralstonia eutropha JMP134	1	1	264198
strain	Staphylococcus aureus subsp. aureus M013	1	1	1118959
strain	Streptomyces scabiei 87.22	1	1	680198
strain	Streptococcus dysgalactiae subsp. equisimilis RE378	1	1	617121
strain	Meiothermus ruber DSM 1279	1	1	504728
strain	Bacillus cereus B4264	1	1	405532
strain	Streptococcus pneumoniae R6	1	1	171101
strain	Streptococcus uberis 0140J	1	1	218495
strain	Desulfovibrio africanus str. Walvis Bay	1	1	690850
strain	Francisella tularensis subsp. holarctica OSU18	1	1	393011
strain	Rhodopseudomonas palustris TIE-1	1	1	395960
strain	Mycobacterium chubuense NBB4	1	1	710421
strain	Pasteurella multocida subsp. multocida str. Pm70	1	1	272843
strain	Bacillus subtilis BSn5	1	1	936156
strain	Sodalis glossinidius str. 'morsitans'	1	1	343509
strain	Staphylococcus aureus subsp. aureus ST398	1	1	523796
strain	Mycobacterium smegmatis JS623	1	1	710686
strain	Geobacillus thermoglucosidasius C56-YS93	1	1	634956
strain	Shigella sonnei 53G	1	1	216599
strain	Streptococcus agalactiae SA20-06	1	1	1231389
strain	Leuconostoc carnosum JB16	1	1	1229758
no rank	cellular organisms	4985783	151	131567
no rank	Bacteroidetes/Chlorobi group	495470	3	68336
no rank	dsDNA viruses, no RNA stage	199	0	35237
no rank	unclassified Siphoviridae	191	100	196894
no rank	ssDNA viruses	53	0	29258
no rank	unclassified Burkholderiales	8	0	119065
no rank	candidate division SR1	2	0	221235
no rank	unclassified phages	2	0	12333
no rank	unclassified Bacteria	2	0	2323
no rank	unclassified Betaproteobacteria	1	0	119066
no rank	unclassified Epsilonproteobacteria	1	0	34035
no rank	unclassified Myoviridae	1	0	196896
no rank	unclassified Gammaproteobacteria	1	0	118884
unclassified	unclassified	1568100	1568100	0
