addSubNode	phyext2
as	phyext2class
as,phylo,phylo4d_ext-method	phyext2class
as,phylo4,phylo4d_ext-method	phyext2class
as,phylo4d,phylo4d_ext-method	phyext2class
as-method	phyext2class
coerce,phylo,phylo4d_ext-method	phyext2class
coerce,phylo4,phylo4d_ext-method	phyext2class
coerce,phylo4d,phylo4d_ext-method	phyext2class
coerce-methods	phyext2class
collapse.singletons	phyext2
collapse.subnodes	phyext2
collapse.to.singles	phyext2
contData	phyext2
deep.phy.copy	phyext2
discData	phyext2
expand.singles	phyext2
get.nexus.comments	phyext2
get.nodenames	phyext2
get.tree.weights	phyext2
getEmptyDataFrame	phyext2
getSubNodeData	phyext2
getSubNodeEdgeInds	phyext2
getSubNodePosish	phyext2
guess.datatype	phyext2
has.block	phyext2
has.characters2	phyext2
has.weights	phyext2
hasData	phyext2methods
hasData,list-method	phyext2methods
hasData,phylo-method	phyext2methods
hasData,phylo4-method	phyext2methods
hasData,phylo4d-method	phyext2methods
hasData-methods	phyext2methods
hasDataColumn	phyext2methods
hasDataColumn,phylo,ANY-method	phyext2methods
hasDataColumn,phylo4,ANY-method	phyext2methods
hasDataColumn,phylo4d,character-method	phyext2methods
hasDataColumn,phylo4d,numeric-method	phyext2methods
hasDataColumn-methods	phyext2methods
hasSubNodes	phyext2methods
hasSubNodes,list-method	phyext2methods
hasSubNodes,phylo-method	phyext2methods
hasSubNodes,phylo4-method	phyext2methods
hasSubNodes,phylo4d_ext-method	phyext2methods
hasSubNodes-methods	phyext2methods
hasWeight	phyext2class
hasWeight,list-method	phyext2class
hasWeight,phylo4d_ext-method	phyext2class
is.simmap	phyext2
match.order	phyext2
newlabels.v15	phyext2
newlabels.v1x	phyext2
noneData	phyext2
nSubNodes	phyext2
phyext	phyext2methods
phyext,character-method	phyext2methods
phyext,list-method	phyext2methods
phyext,phylo-method	phyext2methods
phyext,phylo4-method	phyext2methods
phyext,phylo4d-method	phyext2methods
phyext,phylo4d_ext-method	phyext2methods
phyext-methods	phyext2methods
phyextPlot	phyext2
phylo4d_ext-class	phyext2class
plot,phylo4d_ext,missing-method	phyext2class
read.characters2	phyext2
read.nexus.block	phyext2
read.nexus.simmap	phyext2
read.simmap	phyext2
read.simmap.new	phyext2
rmdata	phyext2methods
rmdata,brownie,character,missing-method	phyext2methods
rmdata,brownie,numeric,ANY-method	phyext2methods
rmdata,brownie,numeric,missing-method	phyext2methods
rmdata,brownie,numeric,numeric-method	phyext2methods
rmdata,list,ANY,missing-method	phyext2methods
rmdata,phylo4d,character,missing-method	phyext2methods
rmdata,phylo4d,numeric,missing-method	phyext2methods
rmdata,phylo4d_ext,character,missing-method	phyext2methods
rmdata,phylo4d_ext,numeric,missing-method	phyext2methods
rmdata,phylo4d_ext,numeric,numeric-method	phyext2methods
rmdata-methods	phyext2methods
show,phylo4d_ext-method	phyext2class
showSubNodes	phyext2
snbranch	phyext2class
snbranch,list-method	phyext2class
snbranch,phylo4d_ext-method	phyext2class
sndata	phyext2class
sndata,list-method	phyext2class
sndata,phylo4d_ext-method	phyext2class
sndata<-	phyext2class
sndata<-,list-method	phyext2class
sndata<-,phylo4d_ext-method	phyext2class
snid	phyext2class
snid,list-method	phyext2class
snid,phylo4d_ext-method	phyext2class
snposition	phyext2class
snposition,list-method	phyext2class
snposition,phylo4d_ext-method	phyext2class
strip	phyext2
tipdate.ci	phyext2
treeHeight	phyext2methods
treeHeight,phylo4-method	phyext2methods
treeHeight,phylo4d-method	phyext2methods
treeHeight,phylo4d_ext-method	phyext2methods
treeHeight-methods	phyext2methods
validPhylo4d_ext	phyext2
weight	phyext2class
weight,list-method	phyext2class
weight,phylo4d_ext-method	phyext2class
weight<-	phyext2class
weight<-,list-method	phyext2class
weight<-,phylo4d_ext-method	phyext2class
write.characters2	phyext2
write.nexus.simmap	phyext2
write.simmap	phyext2
write.simmap.new	phyext2
write.simmap.old	phyext2
